AI/ML Engineer, Platform and Agents

Amide Technologies is a Massachusetts-based biotech company that designs therapeutic peptides and proteins. They are seeking an AI/ML Engineer to build the platform and agent layer that connects scientific data, internal models, and experimental decision-making.

Responsibilities:

• Build internal AI agents and workflow tools that help scientists query data, interpret model outputs and make design decisions
• Integrate synthesis, assay, ELN/LIMS, and computational data into model-ready layers that can support repeatable learning loops
• Orchestrate lab-in-the-loop modeling workflows that connect design, synthesis, testing, analysis and next-round recommendation
• Partner with lab automation and scientific software colleagues to improve data capture, traceability, and handoffs between experimental and computational teams
• Build applications, APIs and data services that expose ML capabilities to scientific users
• Work with outsourced infrastructure, MLOps, or data-engineering partners while maintaining strong internal ownership of scientific requirements and platform behavior
• Contribute to platform governance, documentation, reproducibility and practical standards for model use in project decisions